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1

Enveloping triangulation method for detecting internal cavities in proteins and algorithm for computing their surface areas and volumes

Ján Buša, Shura Hayryan, Chin-Kun Hu, Jaroslav Skřivánek, Ming-Chya Wu

Journal:

Journal of Computational Chemistry

Year:

2009

Language:

english

File:

PDF, 314 KB

english, 2009

2

Universal finite-size scaling functions with exact nonuniversal metric factors

Wu, Ming-Chya, Hu, Chin-Kun, Izmailian, N. Sh.

Journal:

Physical Review E

Year:

2003

Language:

english

File:

PDF, 474 KB

english, 2003

3

Preface

Chin-Kun Hu, K.-t. Leung, Ming-Chya Wu

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2005

Language:

english

File:

PDF, 132 KB

english, 2005

4

Hydrophobic condensation and modular assembly model of protein folding

Tian-Yow Tsong, Chin-Kun Hu, Ming-Chya Wu

Journal:

Year:

2008

Language:

english

File:

PDF, 1.67 MB

english, 2008

5

The role of tryptophan in staphylococcal nuclease stability

Hong-Yu Hu, Ming-Chya Wu, Huey-Jen Fang, Michael D. Forrest, Chin-Kun Hu, Tian Yow Tsong, Hueih Min Chen

Journal:

Biophysical Chemistry

Year:

2010

Language:

english

File:

PDF, 1012 KB

english, 2010

6

ARVO: A Fortran package for computing the solvent accessible surface area and the excluded volume of overlapping spheres via analytic equations

Ján Buša, Jozef Džurina, Edik Hayryan, Shura Hayryan, Chin-Kun Hu, Ján Plavka, Imrich Pokorný, Jaroslav Skřivánek, Ming-Chya Wu

Journal:

Computer Physics Communications

Year:

2005

Language:

english

File:

PDF, 554 KB

english, 2005

7

Compact dimension of denatured states of staphylococcal nuclease

C.-Y. Chow, Ming-Chya Wu, Huey-Jen Fang, Chin-Kun Hu, Hueih-Min Chen, Tian-Yow Tsong

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2008

Language:

english

File:

PDF, 527 KB

english, 2008

8

Histogram Monte Carlo position-space renormalization group: Applications to the site percolation

Chin-Kun Hu, Chi-Ning Chen, F. Y. Wu

Journal:

Journal of Statistical Physics

Year:

1996

Language:

english

File:

PDF, 300 KB

english, 1996

9

CAVE: A package for detection and quantitative analysis of internal cavities in a system of overlapping balls: Application to proteins

Ján Buša, Shura Hayryan, Chin-Kun Hu, Jaroslav Skřivánek, Ming-Chya Wu

Journal:

Computer Physics Communications

Year:

2010

Language:

english

File:

PDF, 316 KB

english, 2010

10

Porphyromonas gingivalis-related cardiac cell apoptosis was majorly co-activated by p38 and extracellular signal-regulated kinase pathways

Shin-Da Lee, Cheng-Chung Wu, Wei-Wen Kuo, James A. Lin, Jin-Ming Hwang, Min-Chi Lu, Li-Ming Chen, His-Hsien Hsu, Chin-Kun Wang, Sheng-Huang Chang, Chih-Yang Huang

Journal:

Journal of Periodontal Research

Year:

2006

Language:

english

File:

PDF, 397 KB

english, 2006

11

ARVO-CL: The OpenCL version of the ARVO package — An efficient tool for computing the accessible surface area and the excluded volume of proteins via analytical equations

Ján Buša Jr., Shura Hayryan, Ming-Chya Wu, Ján Buša, Chin-Kun Hu

Journal:

Computer Physics Communications

Year:

2012

Language:

english

File:

PDF, 193 KB

english, 2012

12

Thermostability of the N-Terminal RNA-Binding Domain of the SARS-CoV Nucleocapsid Protein: Experiments and Numerical Simulations

Fang, Huey-Jen, Chen, Yong-Zhong, Li, Mai Suan, Wu, Ming-Chya, Chang, Chun-Ling, Chang, Chung-ke, Hsu, Yen-lan, Huang, Tai-huang, Chen, Hueih-Min, Tsong, Tian-Yow, Hu, Chin-Kun

Journal:

Biophysical Journal

Year:

2009

Language:

english

File:

PDF, 1.25 MB

english, 2009

13

Partition Function Zeros of the Square Lattice Potts Model

Chen, Chi-Ning, Hu, Chin-Kun, Wu, F. Y.

Journal:

Physical Review Letters

Year:

1996

Language:

english

File:

PDF, 161 KB

english, 1996

14

Curvature effect on the surface diffusion of silver adatoms on carbon nanotubes: Deposition experiments and numerical simulations

Wu, Ming-Chya, Li, Cui-Lian, Hu, Chin-Kun, Chang, Yuan-Chih, Liaw, Yuan-Hong, Huang, Li-Wei, Chang, Chia-Seng, Tsong, Tien-Tzou, Hsu, Tung

Journal:

Physical Review B

Year:

2006

Language:

english

File:

PDF, 1.03 MB

english, 2006

15

Inhibitory Effect of Betel Quid on the Volatility of Methyl Mercaptan

Wang, Chin-Kun, Chen, Su-Lin, Wu, Mei-Guey

Journal:

Journal of Agricultural and Food Chemistry

Year:

2001

Language:

english

File:

PDF, 70 KB

english, 2001

16

Unzipping of DNA with correlated base sequence

Allahverdyan, A. E., Gevorkian, Zh. S., Hu, Chin-Kun, Wu, Ming-Chya

Journal:

Physical Review E

Year:

2004

Language:

english

File:

PDF, 713 KB

english, 2004

17

Publisher’s Note: Universal finite-size scaling functions with exact nonuniversal metric factors [Phys. Rev. E 67, 065103(R) (2003)]

Wu, Ming-Chya, Hu, Chin-Kun, Izmailian, N. Sh.

Journal:

Physical Review E

Year:

2003

File:

PDF, 9 KB

2003

18

Finite-size corrections and scaling for the triangular lattice dimer model with periodic boundary conditions

Izmailian, N. Sh., Oganesyan, K. B., Wu, Ming-Chya, Hu, Chin-Kun

Journal:

Physical Review E

Year:

2006

Language:

english

File:

PDF, 619 KB

english, 2006

19

Empirical mode decomposition and synchrogram approach to cardiorespiratory synchronization

Wu, Ming-Chya, Hu, Chin-Kun

Journal:

Physical Review E

Year:

2006

Language:

english

File:

PDF, 2.04 MB

english, 2006

20

Directed Compact Lattice Animals, Restricted Partitions of an Integer, and the Infinite-State Potts Model

Wu, F. Y., Rollet, G., Huang, H. Y., Maillard, J. M., Hu, Chin-Kun, Chen, Chi-Ning

Journal:

Physical Review Letters

Year:

1996

Language:

english

File:

PDF, 158 KB

english, 1996

21

Phase statistics approach to human ventricular fibrillation

Wu, Ming-Chya, Watanabe, Eiichi, Struzik, Zbigniew R., Hu, Chin-Kun, Yamamoto, Yoshiharu

Journal:

Physical Review E

Year:

2009

Language:

english

File:

PDF, 755 KB

english, 2009

22

High-Power GaN-Based Light-Emitting Diodes with Transparent Indium Zinc Oxide Films

Uang, Kai-Ming, Wang, Shui-Jinn, Chen, Shiue-Lung, Wu, Chin-Kun, Chang, Shu-Cheng, Chen, Tron-Min, Liou, Bor-Wen

Journal:

Japanese Journal of Applied Physics

Year:

2005

Language:

english

File:

PDF, 166 KB

english, 2005

23

CAVE-CL: An OpenCL version of the package for detection and quantitative analysis of internal cavities in a system of overlapping balls: Application to proteins

Buša, Ján, Buša, Ján, Hayryan, Shura, Hu, Chin-Kun, Wu, Ming-Chya

Journal:

Computer Physics Communications

Year:

2015

Language:

english

File:

PDF, 393 KB

english, 2015

24

CRITICAL POINT OF THE KAGOME POTTS MODEL: A HISTOGRAM MONTE CARLO RENORMALIZATION GROUP DETERMINATION

HU, CHIN-KUN, CHEN, JAU-ANN, WU, F. Y.

Journal:

Modern Physics Letters B

Year:

1994

File:

PDF, 187 KB

1994

25

[AIP NOISE AND FLUCTUATIONS: 19th International Conference on Noise and Fluctuations; ICNF 2007 - Tokyo (Japan) (9-14 September 2007)] AIP Conference Proceedings - Temporal evolution for the phase histogram of ECG during human ventricular fibrillation

Wu, Ming-Chya, Struzik, Zbigniew R., Watanabe, Eiichi, Yamamoto, Yoshiharu, Hu, Chin-Kun

Year:

2007

Language:

english

File:

PDF, 330 KB

english, 2007

26

Outcomes of Obese, Clozapine-Treated Inpatients With Schizophrenia Placed on a Six-Month Diet and Physical Activity Program

Wu, Mei-Kuei, Wang, Chin-Kun, Bai, Ya-Mei, Huang, Chih-Yang, Lee, Shin-Da

Journal:

Psychiatric Services

Year:

2007

Language:

english

File:

PDF, 208 KB

english, 2007

27

Universal geometrical factor of protein conformations as a consequence of energy minimization

Wu, Ming-Chya, Li, Mai Suan, Ma, Wen-Jong, Kouza, Maksim, Hu, Chin-Kun

Journal:

EPL (Europhysics Letters)

Year:

2011

Language:

english

File:

PDF, 382 KB

english, 2011

28

Integrated Tungsten Chemical Mechanical Polishing Process Characterization for Via Plug Interconnection in Ultralarge Scale Integrated Circuits

Wang, Chin-Kun, Wu, Hua-Shu, Ou, Nai-Tien, Cheng, Huang-Chung

Journal:

Japanese Journal of Applied Physics

Year:

2002

Language:

english

File:

PDF, 1.79 MB

english, 2002

29

The 6-vertex model of hydrogen-bonded crystals with bond defects

Izmailian, N Sh, Hu, Chin-Kun, Wu, F Y

Journal:

Journal of Physics A: Mathematical and General Physics

Year:

2000

Language:

english

File:

PDF, 135 KB

english, 2000

30

Critical point of the Kagomé Potts model: a Monte Carlo renormalization group and scaling determination

Chen, Jau-Ann, Hu, Chin-Kun, Wu, F Y

Journal:

Journal of Physics A: Mathematical and General Physics

Year:

1998

Language:

english

File:

PDF, 254 KB

english, 1998

31

Exact partition functions of the Ising model on M $times$ N planar lattices with periodic$ndash$aperiodic boundary conditions

Wu, Ming-Chya, Hu, Chin-Kun

Journal:

Journal of Physics A: Mathematical and General Physics

Year:

2002

Language:

english

File:

PDF, 1.05 MB

english, 2002

32

Differential Effects of Bariatric Surgery Versus Exercise on Excessive Visceral Fat Deposits

Wu, Fu-Zong, Huang, Yi-Luan, Wu, Carol C., Wang, Yen-Chi, Pan, Hsiang-Ju, Huang, Chin-Kun, Yeh, Lee-Ren, Wu, Ming-Ting

Journal:

Medicine (Medicine Publishing Company Ltd)

Year:

2016

Language:

english

File:

PDF, 605 KB

english, 2016

33

Finite-size corrections and scaling for the dimer model on the checkerboard lattice

Izmailian, Nickolay Sh., Wu, Ming-Chya, Hu, Chin-Kun

Journal:

Physical Review E

Year:

2016

Language:

english

File:

PDF, 1.16 MB

english, 2016

34

Beneficial efficacy of various propolis extracts and their digestive products by in vitro simulated gastrointestinal digestion

Yen, Chi-Hua, Chiu, Hui-Fang, Wu, Chui-Hua, Lu, Yan-Ying, Han, Yi-Chun, Shen, You-Cheng, Venkatakrishnan, Kamesh, Wang, Chin-Kun

Journal:

Lebensmittel-Wissenschaft und-Technologie / Food Science and Technology

Year:

2017

Language:

english

File:

PDF, 4.17 MB

english, 2017

35

Indicator of serious flight delays with the approach of time-delay stability

Wang, Yan-Jun, Zhu, Yun-Feng, Zhu, Chen-Ping, Wu, Fan, Yang, Hui-Jie, Yan, Yong-Jie, Hu, Chin-Kun

Journal:

Physica A: Statistical Mechanics and its Applications

Year:

2019

Language:

english

File:

PDF, 1.87 MB

english, 2019

36

lattice: Finite-size effects

Chen, Chi-Ning, Hu, Chin-Kun, Izmailian, N. Sh., Wu, Ming-Chya

Journal:

Physical Review E

Year:

2019

Language:

english

File:

PDF, 3.14 MB

english, 2019

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